Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757885 to 761783 12226 mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762082 to 763041 12227 mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763401 to 765833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766288 to 767441 12229 mRNA_3862: 12230 - SUPERFAMILY--SSF52047, at 767659 to 769319 12230
Group Condition mRNA_3858 mRNA_3859 mRNA_3860 mRNA_3861 mRNA_3862
12226
12227
12228
12229
12230
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.5 -0.0 -0.9 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.1 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.1 0.1 0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.0 -0.1 0.2
growth on ypd YPD 0.1 0.1 -0.2 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 -0.1 0.5 -0.1
growth on oleic acid YNB Glucose -0.1 -0.0 0.2 -0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 0.0 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 0.3 0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.5 0.1 0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.5 -0.0 0.2 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.3 -0.1 0.2 0.4
auxotrophy YNB Glucose 75mM Arginine 0.1 0.4 0.0 0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.4 0.1 0.1 0.0
auxotrophy YNB Glucose -0.0 0.4 0.0 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.2 0.4 -0.2
growth on oleic acid YNB Oleic Acid -0.0 0.4 0.1 0.1 0.2
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.1 0.4 0.4
auxotrophy Dropout Complete 0.2 0.4 0.1 0.4 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.6 0.1 0.4 0.1
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