Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3857: 12225 - Interpro Mysoin-binding motif of peroxisomes, at 754082 to 757282 12225 mRNA_3858: 12226 - K17890 ATG16L1 autophagy-related protein 16-1, at 757885 to 761783 12226 mRNA_3859: 12227 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 762082 to 763041 12227 mRNA_3860: 12228 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 763401 to 765833 12228 mRNA_3861: 12229 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 766288 to 767441 12229
Group Condition mRNA_3857 mRNA_3858 mRNA_3859 mRNA_3860 mRNA_3861
12225
12226
12227
12228
12229
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 -0.4 -0.5 -0.0 -0.9
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 -0.3 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 -0.2 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.2 -0.1 0.0 0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.1 -0.1 0.1 0.3
growth on ypd YPD -0.3 0.1 0.1 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 -0.0 -0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 -0.1 0.0 -0.1
growth on oleic acid YNB Glucose 0.1 -0.1 -0.0 0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.3 -0.5 -0.0 0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 0.1 0.4 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 0.4 0.1 0.1
auxotrophy YNB Glucose -0.3 -0.0 0.4 0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0 0.3 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.1 0.3 -0.1 0.2
growth on oleic acid YNB Oleic Acid -0.1 -0.0 0.4 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.0 0.1 0.1 0.1 0.4
auxotrophy Dropout Complete -0.5 0.2 0.4 0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.2 0.5 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 0.4 0.2 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.3 0.6 0.1 0.4
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