Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3848: 12216 - KOG1817 Ribonuclease, at 733873 to 734892 12216 mRNA_3849: 12217 - Hypothetical Protein, at 735253 to 736177 12217 mRNA_3850: 12218 - BLAST Protein kinase-like domain protein [Cordyceps confrag..., at 738675 to 741507 12218 mRNA_3851: 12219 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 742055 to 744016 12219 mRNA_3852: 12220 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF00043,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 744290 to 745525 12220
Group Condition mRNA_3848 mRNA_3849 mRNA_3850 mRNA_3851 mRNA_3852
12216
12217
12218
12219
12220
growth on ypd YPD -0.8 -0.1 0.1 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.1 -0.2 0.2 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.2 0.2 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -0.2 0.0 -0.0
growth on oleic acid YNB Glucose 0.4 0.0 0.2 -0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 0.1 -0.0 0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 -0.2 0.0 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.1 0.1 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.0 0.1 -0.0 -0.2
growth on oleic acid YNB Oleic Acid 0.3 0.0 0.3 -0.1 -0.2
auxotrophy Dropout Complete 0.3 -0.1 -0.1 0.5 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.7 -0.2 -0.0 0.2 -0.1
auxotrophy YNB Glucose 0.3 -0.2 -0.2 0.6 0.0
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.2 0.2 0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.4 0.2 0.5 -0.5
growth on ricinoleic acid YNB Glucose 0.7 -0.1 0.4 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.1 0.7 0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.6 -0.1 0.4 -0.5 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.4 -0.1 0.5 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.6 -0.0 0.6 0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.5 -0.0 0.6 0.6 0.0
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