Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723329 to 725612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726085 to 727619 12213 mRNA_3846: 12214 - HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667, at 728608 to 730842 12214 mRNA_3847: 12215 - Hypothetical Protein, at 732647 to 733359 12215 mRNA_3848: 12216 - KOG1817 Ribonuclease, at 733873 to 734892 12216
Group Condition mRNA_3844 mRNA_3845 mRNA_3846 mRNA_3847 mRNA_3848
12212
12213
12214
12215
12216
growth on ypd YPD 0.3 -0.3 -0.0   -0.8
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 0.0   0.7
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 -0.3 0.0   -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 -0.1   0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.1   0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 -0.0   -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 -0.1 0.1   0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.2 -0.1   0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1 0.1   0.3
auxotrophy Dropout Complete 0.1 0.4 -0.1   0.3
growth on ricinoleic acid YNB Glucose 0.1 0.0 0.1   0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.2 -0.0   0.3
growth on oleic acid YNB Glucose 0.1 0.2 0.2   0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.3 0.0   0.0
auxotrophy YNB Glucose -0.1 0.6 0.1   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.4   1.6
auxotrophy YNB Glucose 75mM Arginine 0.1 0.5 -0.1   0.6
growth on oleic acid YNB Oleic Acid 0.4 0.3 0.0   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 -0.1   1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.0 -0.1   1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.2 0.2   1.6
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