Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718852 to 719357
12210
mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719514 to 723213
12211
mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723329 to 725612
12212
mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726085 to 727619
12213
mRNA_3846: 12214 - HMMPfam-HORMA domain-PF02301,HMMPfam-Zinc-finger double-stranded RNA-binding-PF12171,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-HORMA domain profile.-PS50815,SMART-zinc finger-SM00355,SUPERFAMILY--SSF56019,SUPERFAMILY--SSF57667, at 728608 to 730842
12214
Group
Condition
mRNA_3842
mRNA_3843
mRNA_3844
mRNA_3845
mRNA_3846
12210
12211
12212
12213
12214
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.2
-0.2
-0.1
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.0
-0.3
-0.3
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.1
0.0
-0.1
growth on ypd
YPD
-0.5
0.3
0.3
-0.3
-0.0
growth on ricinoleic acid
YNB Glucose
-0.4
0.0
0.1
0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
0.2
0.4
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.2
-0.2
0.2
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.1
0.5
-0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.0
-0.1
0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
-0.1
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.0
-0.0
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.5
-0.0
0.4
0.3
0.0
auxotrophy
Dropout Complete
-0.1
-0.1
0.1
0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.2
0.4
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.3
0.3
0.2
-0.0
growth on oleic acid
YNB Glucose
0.1
-0.1
0.1
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.2
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.2
0.7
-0.3
0.0
auxotrophy
YNB Glucose
0.1
-0.2
-0.1
0.6
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
0.1
0.5
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.3
0.6
0.3
0.0
remove
mRNA_3842
plot
remove
mRNA_3843
plot
remove
mRNA_3844
remove
mRNA_3845
plot
remove
mRNA_3846
plot