Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716088 to 718591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718852 to 719357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719514 to 723213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723329 to 725612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726085 to 727619 12213
Group Condition mRNA_3841 mRNA_3842 mRNA_3843 mRNA_3844 mRNA_3845
12209
12210
12211
12212
12213
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.1 -0.2 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.5 -0.4 0.3 0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.4 0.0 0.2 0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 -0.1 0.2 0.7 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 0.0 -0.3 -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.4 0.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 0.4 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.3 -0.0 -0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0 -0.2 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.0 -0.1 0.0
growth on oleic acid YNB Glucose -0.6 0.1 -0.1 0.1 0.2
growth on oleic acid YNB Oleic Acid -0.5 -0.5 -0.0 0.4 0.3
growth on ypd YPD -0.0 -0.5 0.3 0.3 -0.3
auxotrophy YNB Glucose -0.6 0.1 -0.2 -0.1 0.6
auxotrophy Dropout Complete -0.5 -0.1 -0.1 0.1 0.4
auxotrophy YNB Glucose 75mM Arginine -0.8 0.3 -0.2 0.1 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.5 0.1 0.5 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.9 0.2 0.4 0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3 -0.2 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.0 -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.1 -0.3 0.6 0.3
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