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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704391 to 706480
12205
mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706826 to 713191
12206
mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713356 to 714077
12207
mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714373 to 715825
12208
mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716088 to 718591
12209
Group
Condition
mRNA_3837
mRNA_3838
mRNA_3839
mRNA_3840
mRNA_3841
12205
12206
12207
12208
12209
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-1.3
-1.5
0.2
-1.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.6
-1.3
-0.0
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.7
-0.6
-0.1
-1.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.6
-2.0
-0.6
0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.3
-0.1
-0.0
-1.4
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
-0.4
0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.1
-0.3
-0.3
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
-0.5
-0.4
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.0
-0.8
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.6
-0.5
0.5
-0.8
growth on oleic acid
YNB Glucose
0.4
-0.4
0.1
-0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.0
0.2
-0.4
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
0.1
-0.2
0.1
growth on oleic acid
YNB Oleic Acid
0.3
-0.3
0.4
-0.3
-0.5
auxotrophy
YNB Glucose
0.3
-0.3
-0.1
0.4
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.5
-0.5
-0.3
-0.3
auxotrophy
Dropout Complete
0.3
-0.2
0.2
0.0
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.3
-0.7
0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
0.5
-0.2
-0.9
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.5
-0.1
0.5
-0.2
growth on ypd
YPD
0.2
-0.2
0.3
0.5
-0.0
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