Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704391 to 706480 12205 mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706826 to 713191 12206 mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713356 to 714077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714373 to 715825 12208 mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716088 to 718591 12209
Group Condition mRNA_3837 mRNA_3838 mRNA_3839 mRNA_3840 mRNA_3841
12205
12206
12207
12208
12209
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -1.3 -1.5 0.2 -1.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.6 -1.3 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.7 -0.6 -0.1 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.6 -2.0 -0.6 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.3 -0.1 -0.0 -1.4
growth on ricinoleic acid YNB Glucose -0.1 -0.4 -0.4 0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1 -0.3 -0.3 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -0.5 -0.4 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.0 -0.8 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.6 -0.5 0.5 -0.8
growth on oleic acid YNB Glucose 0.4 -0.4 0.1 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 -0.4 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 0.1 -0.2 0.1
growth on oleic acid YNB Oleic Acid 0.3 -0.3 0.4 -0.3 -0.5
auxotrophy YNB Glucose 0.3 -0.3 -0.1 0.4 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.5 -0.5 -0.3 -0.3
auxotrophy Dropout Complete 0.3 -0.2 0.2 0.0 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 -0.7 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 0.5 -0.2 -0.9
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.5 -0.1 0.5 -0.2
growth on ypd YPD 0.2 -0.2 0.3 0.5 -0.0
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