Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3819: 12187 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 659390 to 660393 12187 mRNA_3820: 12188 - K20046 SLA1 actin cytoskeleton-regulatory complex protein SLA1, at 660836 to 665185 12188 mRNA_3821: 12189 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 665422 to 669105 12189 mRNA_3822: 12190 - HMMPfam-Protein of unknown function (DUF2781)-PF10914,PIRSF--PIRSF031032, at 669228 to 670038 12190 mRNA_3823: 12191 - Hypothetical Protein, at 670135 to 670720 12191
Group Condition mRNA_3819 mRNA_3820 mRNA_3821 mRNA_3822 mRNA_3823
12187
12188
12189
12190
12191
ypd buoyancy 40 hrs No Buoyancy Separation -2.0   0.4 -0.6  
facs on lipid accumulation Sorted High BODIPY Gate 0.3   -0.3 -1.7  
growth on oleic acid YNB Glucose 0.2   -0.3 -0.9  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.2 -0.4  
growth on ricinoleic acid YNB Glucose -0.2   -0.2 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   -0.4 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.5   0.1 -0.8  
growth on oleic acid YNB Oleic Acid 0.6   -0.3 -0.4  
growth on ypd YPD 0.4   0.0 -0.4  
auxotrophy YNB Glucose 75mM Methionine 0.7   0.2 -0.8  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   -0.5 0.6  
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.0 0.4  
auxotrophy YNB Glucose 0.7   0.0 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.0 0.5  
ypd buoyancy 40 hrs High Buoyancy 0.2   -0.2 0.6  
ypd buoyancy 40 hrs Median Buoyancy 0.5   0.2 0.1  
auxotrophy Dropout Complete 1.5   -0.1 -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.8   -0.2 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.4   -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.2   -0.2 1.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.1   0.1 0.5  
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