Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3815: 12183 - K06631 PLK1 polo-like kinase 1, at 644354 to 647784 12183 mRNA_3816: 12184 - KOG3613 Dopey and related predicted leucine zipper transcription factors, at 648075 to 655221 12184 mRNA_3817: 12185 - SUPERFAMILY--SSF52047, at 655525 to 657844 12185 mRNA_3818: 12186 - K09650 PARL, PSARL, PCP1 rhomboid-like protein, at 657932 to 659126 12186 mRNA_3819: 12187 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 659390 to 660393 12187
Group Condition mRNA_3815 mRNA_3816 mRNA_3817 mRNA_3818 mRNA_3819
12183
12184
12185
12186
12187
ypd buoyancy 40 hrs No Buoyancy Separation -4.6 -0.3 0.0 0.6 -2.0
facs on lipid accumulation Sorted Low BODIPY Gate -2.6 -0.1 -0.0 -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -3.2 0.2 -0.1 0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 1.0 -0.2 -0.5 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 0.3 -0.3 -0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.3 0.4 -0.3 0.0 0.3
growth on ricinoleic acid YNB Glucose -0.9 0.7 -0.3 -0.1 -0.2
growth on oleic acid YNB Glucose -0.7 0.5 -0.2 -0.3 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.9 0.6 -0.1 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.1 0.0 0.1 0.5
auxotrophy YNB Glucose 75mM Arginine -0.7 0.6 0.0 -0.0 0.5
auxotrophy YNB Glucose -0.3 0.7 -0.1 -0.1 0.7
auxotrophy YNB Glucose 75mM Methionine -0.4 0.7 0.1 -0.2 0.7
growth on oleic acid YNB Oleic Acid -0.5 1.0 0.0 -0.1 0.6
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.0 0.3 0.2 0.2
growth on ypd YPD 1.8 0.1 0.1 -0.7 0.4
auxotrophy Dropout Complete -0.5 0.8 0.3 -0.0 1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.3 -0.1 0.6 1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 -0.0 0.5 2.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.3 -0.1 1.1 1.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2 0.3 0.1 0.4 2.1
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