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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640122 to 642119
12181
mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642140 to 643933
12182
mRNA_3815: 12183 - K06631 PLK1 polo-like kinase 1, at 644354 to 647784
12183
mRNA_3816: 12184 - KOG3613 Dopey and related predicted leucine zipper transcription factors, at 648075 to 655221
12184
mRNA_3817: 12185 - SUPERFAMILY--SSF52047, at 655525 to 657844
12185
Group
Condition
mRNA_3813
mRNA_3814
mRNA_3815
mRNA_3816
mRNA_3817
12181
12182
12183
12184
12185
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.8
-4.6
-0.3
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
-3.2
0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.3
-2.6
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-0.5
-1.0
0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.5
-2.0
1.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.2
-1.3
0.4
-0.3
growth on oleic acid
YNB Glucose
-0.7
-0.2
-0.7
0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.1
-0.9
0.6
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.4
0.1
0.0
growth on ricinoleic acid
YNB Glucose
0.2
0.2
-0.9
0.7
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
-0.7
0.6
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
-0.5
1.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
-0.0
-0.4
0.2
-0.0
auxotrophy
Dropout Complete
0.1
-0.0
-0.5
0.8
0.3
auxotrophy
YNB Glucose
0.4
-0.1
-0.3
0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.1
0.5
-0.0
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.5
-0.2
-0.4
0.7
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.8
0.3
-0.4
0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.2
-0.0
0.3
-0.1
growth on ypd
YPD
0.3
-0.3
1.8
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.4
1.2
0.3
0.1
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