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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3810: 12178 - K12869 CRN, CRNKL1, CLF1, SYF3 crooked neck, at 632455 to 635215
12178
mRNA_3811: 12179 - Hypothetical Protein, at 635575 to 638591
12179
mRNA_3812: 12180 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 638841 to 639831
12180
mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640122 to 642119
12181
mRNA_3814: 12182 - PRINTS-Proline rich extensin signature-PR01217, at 642140 to 643933
12182
Group
Condition
mRNA_3810
mRNA_3811
mRNA_3812
mRNA_3813
mRNA_3814
12178
12179
12180
12181
12182
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.0
-0.6
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.0
-0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.3
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.3
-0.0
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-0.4
0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.5
0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.2
0.8
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
-0.0
0.5
0.2
growth on oleic acid
YNB Glucose
0.4
0.3
-0.7
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
0.0
-0.1
growth on oleic acid
YNB Oleic Acid
0.4
0.2
-0.2
-0.2
auxotrophy
Dropout Complete
0.3
-0.3
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
-0.1
0.5
0.4
growth on ricinoleic acid
YNB Glucose
0.5
-0.6
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.1
0.3
-0.2
auxotrophy
YNB Glucose
0.4
-0.2
0.4
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
0.2
0.8
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.2
0.5
-0.2
growth on ypd
YPD
0.2
1.2
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.2
0.8
0.3
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