Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586055 to 588728 12158 mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588857 to 589593 12159 mRNA_3792: 12160 - K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5, at 590008 to 594469 12160 mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594813 to 596952 12161
Group Condition mRNA_3789 mRNA_3790 mRNA_3791 mRNA_3792 mRNA_3793
12157
12158
12159
12160
12161
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0     -1.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4     0.7 -0.6
auxotrophy YNB Glucose 0.2     0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2     0.1 -0.2
growth on oleic acid YNB Oleic Acid 0.3     0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2     0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1     0.6 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.4 0.1
auxotrophy Dropout Complete 0.2     0.1 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1     0.6 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0     0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.3     0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     0.5 -0.1
growth on ricinoleic acid YNB Glucose 0.4     0.6 -0.4
auxotrophy YNB Glucose 75mM Arginine 0.2     0.5 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     0.3 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.5     0.2 -0.0
growth on oleic acid YNB Glucose 0.2     0.6 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1     0.6 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.5     -0.8 0.2
growth on ypd YPD 0.3     0.6 0.3
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