Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3788: 12156 - Hypothetical Protein, at 583211 to 584056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586055 to 588728 12158 mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588857 to 589593 12159 mRNA_3792: 12160 - K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5, at 590008 to 594469 12160
Group Condition mRNA_3788 mRNA_3789 mRNA_3790 mRNA_3791 mRNA_3792
12156
12157
12158
12159
12160
facs on lipid accumulation Sorted Low BODIPY Gate -1.4 0.0     0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.2     0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2     0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.8 -0.1     0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 1.0     -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.1     0.3
auxotrophy YNB Glucose -0.2 0.2     0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.4     0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 1.5     -0.8
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0     0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2     0.1
auxotrophy Dropout Complete 0.2 0.2     0.1
growth on ricinoleic acid YNB Glucose -0.4 0.4     0.6
growth on oleic acid YNB Oleic Acid 0.2 0.3     0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3     0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.1     0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1     0.6
auxotrophy YNB Glucose 75mM Arginine 0.2 0.2     0.5
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.5     0.2
growth on oleic acid YNB Glucose 0.2 0.2     0.6
growth on ypd YPD 1.0 0.3     0.6
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