Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581185 to 583154 12155 mRNA_3788: 12156 - Hypothetical Protein, at 583211 to 584056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157 mRNA_3790: 12158 - K07151 STT3 dolichyl-diphosphooligosaccharide--protein glycosyltransferase, at 586055 to 588728 12158 mRNA_3791: 12159 - K00287 folA dihydrofolate reductase, at 588857 to 589593 12159
Group Condition mRNA_3787 mRNA_3788 mRNA_3789 mRNA_3790 mRNA_3791
12155
12156
12157
12158
12159
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.8 -0.1    
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -1.4 0.0    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -1.0 -0.2    
auxotrophy YNB Glucose -0.3 -0.2 0.2    
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 -0.4    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.5 -0.2    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.4 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 -0.0    
growth on ricinoleic acid YNB Glucose -0.0 -0.4 0.4    
auxotrophy YNB Glucose 75mM Arginine -0.5 0.2 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.1 0.1    
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 0.1    
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 0.3    
auxotrophy Dropout Complete -0.1 0.2 0.2    
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.2    
growth on oleic acid YNB Glucose 0.5 0.2 0.2    
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.6 1.5    
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 0.5    
growth on ypd YPD -0.3 1.0 0.3    
growth on oleic acid YNB Oleic Acid 0.6 0.2 0.3    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0 1.0    
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