Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3785: 12153 - K15178 RTF1 RNA polymerase-associated protein RTF1, at 575682 to 577961 12153 mRNA_3786: 12154 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 578477 to 580207 12154 mRNA_3787: 12155 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 581185 to 583154 12155 mRNA_3788: 12156 - Hypothetical Protein, at 583211 to 584056 12156 mRNA_3789: 12157 - K09584 PDIA6, TXNDC7 protein disulfide-isomerase A6, at 584347 to 585517 12157
Group Condition mRNA_3785 mRNA_3786 mRNA_3787 mRNA_3788 mRNA_3789
12153
12154
12155
12156
12157
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -1.3 -0.7 -0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -2.6 0.3 -0.2 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -4.2 0.3 0.0 1.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 -2.9 -0.0 -0.6 1.5
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -1.7 -0.1 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -2.3 1.4 -0.2 -1.4 0.0
growth on ricinoleic acid YNB Glucose -0.7 -0.3 -0.0 -0.4 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3 0.3 -1.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 0.1 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.4 0.5 -0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.6 -1.0 0.2 -0.1 0.2
auxotrophy YNB Glucose -0.1 0.5 -0.3 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 -0.5 0.2 0.2
growth on ypd YPD -0.7 -0.1 -0.3 1.0 0.3
growth on oleic acid YNB Oleic Acid 0.5 -1.4 0.6 0.2 0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.0 -0.1 -0.1 0.3
auxotrophy Dropout Complete 0.3 0.2 -0.1 0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 0.3 0.2 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.7 0.2 -0.0 -0.1 0.1
growth on oleic acid YNB Glucose 0.6 -0.4 0.5 0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 1.8 0.2 -0.4 0.1
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