Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553955 to 556574 12144 mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557180 to 558034 12145 mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558485 to 559797 12146 mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560572 to 561347 12147 mRNA_3780: 12148 - KOG1426 FOG RCC1 domain, at 561594 to 563970 12148
Group Condition mRNA_3776 mRNA_3777 mRNA_3778 mRNA_3779 mRNA_3780
12144
12145
12146
12147
12148
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -2.1 -0.7   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -1.7 0.2   -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.9 -0.2   -0.2
growth on ypd YPD -0.3 0.0 -0.3   -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.0 0.1   -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 0.7 -0.6   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.0 0.6   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.3   0.1
ypd buoyancy 40 hrs High Buoyancy -0.5 0.4 -0.1   -0.0
growth on oleic acid YNB Oleic Acid -1.2 0.8 0.1   0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.5 0.1   -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.6 1.0 -0.4   0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.6 -0.1   -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.6 -0.5   -0.1
growth on oleic acid YNB Glucose -0.0 0.3 0.2   0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.3 -0.1   0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.4 -0.1   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.7 0.4   -0.1
growth on ricinoleic acid YNB Glucose 0.1 0.8 -0.3   0.3
auxotrophy Dropout Complete 0.3 1.0 -0.1   0.0
auxotrophy YNB Glucose 0.5 0.7 -0.0   0.1
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