Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3775: 12143 - KOG2913 Predicted membrane protein, at 552938 to 553662 12143 mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553955 to 556574 12144 mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557180 to 558034 12145 mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558485 to 559797 12146 mRNA_3779: 12147 - HMMPfam-Spc19-PF08287, at 560572 to 561347 12147
Group Condition mRNA_3775 mRNA_3776 mRNA_3777 mRNA_3778 mRNA_3779
12143
12144
12145
12146
12147
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -1.1 -2.1 -0.7  
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.9 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.8 0.7 -0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.2 -1.7 0.2  
growth on ypd YPD -0.2 -0.3 0.0 -0.3  
growth on oleic acid YNB Oleic Acid -0.2 -1.2 0.8 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.5 0.0 0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.6 1.0 -0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.0 -0.0 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.9 -0.0 0.6  
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.5 0.4 -0.1  
growth on ricinoleic acid YNB Glucose -0.4 0.1 0.8 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.1 0.5 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.3 0.6 -0.5  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 0.4 -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 0.7 0.4  
growth on oleic acid YNB Glucose 0.1 -0.0 0.3 0.2  
auxotrophy YNB Glucose 75mM Methionine 0.4 0.2 0.3 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.7 -0.2 0.6 -0.1  
auxotrophy YNB Glucose -0.0 0.5 0.7 -0.0  
auxotrophy Dropout Complete 0.1 0.3 1.0 -0.1  
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