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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3774: 12142 - K01764 E4.4.1.17 cytochrome c heme-lyase, at 551229 to 552274
12142
mRNA_3775: 12143 - KOG2913 Predicted membrane protein, at 552938 to 553662
12143
mRNA_3776: 12144 - HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850, at 553955 to 556574
12144
mRNA_3777: 12145 - K20346 TMED4_9_11 p24 family protein alpha, at 557180 to 558034
12145
mRNA_3778: 12146 - HMMPfam-Endonuclease V-PF04493, at 558485 to 559797
12146
Group
Condition
mRNA_3774
mRNA_3775
mRNA_3776
mRNA_3777
mRNA_3778
12142
12143
12144
12145
12146
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-1.1
-2.1
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
-0.9
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.8
0.7
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.2
-1.7
0.2
growth on ypd
YPD
-0.2
-0.3
0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
-1.2
0.8
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.5
0.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.6
1.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.0
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.9
-0.0
0.6
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.5
0.4
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
0.1
0.8
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.1
0.5
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.3
0.6
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.3
0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
0.7
0.4
growth on oleic acid
YNB Glucose
0.1
-0.0
0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.2
0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
-0.2
0.6
-0.1
auxotrophy
YNB Glucose
-0.0
0.5
0.7
-0.0
auxotrophy
Dropout Complete
0.1
0.3
1.0
-0.1
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