Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541434 to 542462 12137 mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542766 to 544325 12138 mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545294 to 546306 12139 mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546453 to 547644 12140
Group Condition mRNA_3768 mRNA_3769 mRNA_3770 mRNA_3771 mRNA_3772
12136
12137
12138
12139
12140
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.0   -2.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4   1.2   -2.2
growth on ricinoleic acid YNB Glucose -0.4   -0.0   -0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -0.2   -1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -0.4   -0.8
growth on oleic acid YNB Glucose -0.2   -0.4   -0.5
auxotrophy Dropout Complete -0.2   0.1   -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   0.1   -0.5
growth on oleic acid YNB Oleic Acid -0.6   1.0   -1.0
auxotrophy YNB Glucose 75mM Methionine 0.1   0.2   -0.7
auxotrophy YNB Glucose 75mM Arginine 0.3   0.2   -1.0
growth on ypd YPD -0.3   0.0   0.0
auxotrophy YNB Glucose 0.1   0.3   -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   0.3   -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4   0.6   -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   0.9   -0.7
ypd buoyancy 40 hrs High Buoyancy 0.1   0.5   0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1   1.0   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.7   -0.4   0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.1   0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.4   0.9   -0.1
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