Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536936 to 539895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541434 to 542462 12137 mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542766 to 544325 12138 mRNA_3771: 12139 - K02866 RP-L10e, RPL10 large subunit ribosomal protein L10e, at 545294 to 546306 12139
Group Condition mRNA_3767 mRNA_3768 mRNA_3769 mRNA_3770 mRNA_3771
12135
12136
12137
12138
12139
growth on oleic acid YNB Glucose 0.1 -0.2   -0.4  
growth on ricinoleic acid YNB Glucose -0.0 -0.4   -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.7   -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3   0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2   0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2   -0.2  
auxotrophy Dropout Complete 0.1 -0.2   0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1   0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0   0.3  
auxotrophy YNB Glucose 75mM Methionine -0.1 0.1   0.2  
growth on ypd YPD 0.6 -0.3   0.0  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3   0.2  
growth on oleic acid YNB Oleic Acid 0.1 -0.6   1.0  
auxotrophy YNB Glucose 0.3 0.1   0.3  
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1   0.5  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1   1.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.2   0.9  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4   0.6  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.4   1.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.4   0.9  
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