Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3766: 12134 - K20372 TBC1D20, GYP8 TBC1 domain family member 20, at 534427 to 536780 12134 mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536936 to 539895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541434 to 542462 12137 mRNA_3770: 12138 - K12606 RCD1, CNOT9, CAF40 CCR4-NOT transcription complex subunit 9, at 542766 to 544325 12138
Group Condition mRNA_3766 mRNA_3767 mRNA_3768 mRNA_3769 mRNA_3770
12134
12135
12136
12137
12138
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.7 0.7   -0.4
growth on ricinoleic acid YNB Glucose 0.1 -0.0 -0.4   -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 -0.3   0.1
growth on oleic acid YNB Glucose 0.3 0.1 -0.2   -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.1 0.2   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.1 0.2   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.0 -0.2   0.0
growth on ypd YPD -0.4 0.6 -0.3   0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.1   0.1
auxotrophy Dropout Complete 0.4 0.1 -0.2   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 -0.0   0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1 0.1   0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.2 0.1   0.5
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.3   0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1   1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 0.4   0.6
auxotrophy YNB Glucose 0.1 0.3 0.1   0.3
growth on oleic acid YNB Oleic Acid 0.3 0.1 -0.6   1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 -0.4   1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.2 0.2   0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 0.4   0.9
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