Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3765: 12133 - K02902 RP-L28, MRPL28, rpmB large subunit ribosomal protein L28, at 533805 to 534326 12133 mRNA_3766: 12134 - K20372 TBC1D20, GYP8 TBC1 domain family member 20, at 534427 to 536780 12134 mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536936 to 539895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136 mRNA_3769: 12137 - K10669 TRPT1, TPT1 2'-phosphotransferase, at 541434 to 542462 12137
Group Condition mRNA_3765 mRNA_3766 mRNA_3767 mRNA_3768 mRNA_3769
12133
12134
12135
12136
12137
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 -0.7 0.7  
growth on ricinoleic acid YNB Glucose   0.1 -0.0 -0.4  
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.1 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.1 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 0.2 -0.4  
growth on oleic acid YNB Oleic Acid   0.3 0.1 -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 -0.0 -0.2  
ypd buoyancy 40 hrs Median Buoyancy   -0.0 -0.1 0.1  
growth on ypd YPD   -0.4 0.6 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 -0.1 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate   0.0 -0.1 0.2  
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.2 0.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.1 0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.2 0.2  
growth on oleic acid YNB Glucose   0.3 0.1 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 -0.2 0.4  
auxotrophy Dropout Complete   0.4 0.1 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2 -0.1 0.2  
auxotrophy YNB Glucose 75mM Arginine   0.2 -0.1 0.3  
auxotrophy YNB Glucose 75mM Methionine   0.4 -0.1 0.1  
auxotrophy YNB Glucose   0.1 0.3 0.1  
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