Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3764: 12132 - K11808 ADE2 phosphoribosylaminoimidazole carboxylase, at 531400 to 533650 12132 mRNA_3765: 12133 - K02902 RP-L28, MRPL28, rpmB large subunit ribosomal protein L28, at 533805 to 534326 12133 mRNA_3766: 12134 - K20372 TBC1D20, GYP8 TBC1 domain family member 20, at 534427 to 536780 12134 mRNA_3767: 12135 - KOG4535 HEAT and armadillo repeat-containing protein, at 536936 to 539895 12135 mRNA_3768: 12136 - HMMPfam-Protein of unknown function (DUF1275)-PF06912, at 540069 to 541238 12136
Group Condition mRNA_3764 mRNA_3765 mRNA_3766 mRNA_3767 mRNA_3768
12132
12133
12134
12135
12136
ypd buoyancy 40 hrs No Buoyancy Separation     -0.5 -0.7 0.7
growth on ricinoleic acid YNB Glucose     0.1 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy     -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.1 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid     -0.1 0.2 -0.4
growth on oleic acid YNB Oleic Acid     0.3 0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid     0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy     -0.0 -0.1 0.1
growth on ypd YPD     -0.4 0.6 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.2 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate     0.0 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy     -0.2 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 -0.2 0.2
growth on oleic acid YNB Glucose     0.3 0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.1 -0.2 0.4
auxotrophy Dropout Complete     0.4 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.2 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine     0.2 -0.1 0.3
auxotrophy YNB Glucose 75mM Methionine     0.4 -0.1 0.1
auxotrophy YNB Glucose     0.1 0.3 0.1
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