Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3751: 12119 - K11348 BRPF1 bromodomain and PHD finger-containing protein 1, at 499022 to 503388 12119 mRNA_3752: 12120 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 503579 to 505478 12120 mRNA_3753: 12121 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 505655 to 508720 12121 mRNA_3754: 12122 - K01641 E2.3.3.10 hydroxymethylglutaryl-CoA synthase, at 509040 to 510998 12122 mRNA_3755: 12123 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 511333 to 513065 12123
Group Condition mRNA_3751 mRNA_3752 mRNA_3753 mRNA_3754 mRNA_3755
12119
12120
12121
12122
12123
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -3.7    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 -1.7    
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.4 -0.9    
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3 -0.9    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.3 -0.8    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 -0.7    
ypd buoyancy 40 hrs High Buoyancy 0.1 0.3 -0.5    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.1 -0.2    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.0 0.3    
growth on ypd YPD 0.1 -0.1 0.2    
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.0 0.5    
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 0.5    
auxotrophy Dropout Complete -0.3 0.1 0.8    
auxotrophy YNB Glucose -0.2 0.1 0.9    
growth on oleic acid YNB Oleic Acid 0.1 0.1 1.0    
growth on oleic acid YNB Glucose 0.2 0.1 1.0    
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.2 1.7    
growth on ricinoleic acid YNB Glucose -0.0 0.3 1.3    
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.3 1.5    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.6 2.0    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 2.5    
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