Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3750: 12118 - K13421 UMPS uridine monophosphate synthetase, at 497780 to 498794 12118 mRNA_3751: 12119 - K11348 BRPF1 bromodomain and PHD finger-containing protein 1, at 499022 to 503388 12119 mRNA_3752: 12120 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 503579 to 505478 12120 mRNA_3753: 12121 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 505655 to 508720 12121 mRNA_3754: 12122 - K01641 E2.3.3.10 hydroxymethylglutaryl-CoA synthase, at 509040 to 510998 12122
Group Condition mRNA_3750 mRNA_3751 mRNA_3752 mRNA_3753 mRNA_3754
12118
12119
12120
12121
12122
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 -0.2 -3.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 0.1 -1.7  
facs on lipid accumulation Sorted No BODIPY Gate   -0.4 0.4 -0.9  
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.3 -0.9  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0 0.3 -0.8  
ypd buoyancy 40 hrs No Buoyancy Separation   0.1 0.2 -0.7  
ypd buoyancy 40 hrs High Buoyancy   0.1 0.3 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 0.1 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.4 0.0 0.3  
growth on ypd YPD   0.1 -0.1 0.2  
auxotrophy YNB Glucose 75mM Methionine   -0.0 -0.0 0.5  
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.1 0.5  
auxotrophy Dropout Complete   -0.3 0.1 0.8  
auxotrophy YNB Glucose   -0.2 0.1 0.9  
growth on oleic acid YNB Oleic Acid   0.1 0.1 1.0  
growth on oleic acid YNB Glucose   0.2 0.1 1.0  
facs on lipid accumulation Sorted High BODIPY Gate   -0.4 0.2 1.7  
growth on ricinoleic acid YNB Glucose   -0.0 0.3 1.3  
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.3 1.5  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.6 2.0  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 0.1 2.5  
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