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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3747: 12115 - Hypothetical Protein, at 488754 to 489655
12115
mRNA_3748: 12116 - K00658 DLST, sucB 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase), at 490464 to 492382
12116
mRNA_3749: 12117 - HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850, at 492760 to 497695
12117
mRNA_3750: 12118 - K13421 UMPS uridine monophosphate synthetase, at 497780 to 498794
12118
mRNA_3751: 12119 - K11348 BRPF1 bromodomain and PHD finger-containing protein 1, at 499022 to 503388
12119
Group
Condition
mRNA_3747
mRNA_3748
mRNA_3749
mRNA_3750
mRNA_3751
12115
12116
12117
12118
12119
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.7
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
0.0
auxotrophy
YNB Glucose
-0.1
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.2
auxotrophy
Dropout Complete
-0.1
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.1
growth on ypd
YPD
-0.3
0.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.0
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.2
-0.0
growth on oleic acid
YNB Glucose
-0.0
-0.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.1
0.3
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