Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3740: 12108 - Hypothetical Protein, at 469899 to 470347 12108 mRNA_3741: 12109 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 470340 to 473925 12109 mRNA_3742: 12110 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 474492 to 476469 12110 mRNA_3743: 12111 - K15289 SLC35F5 solute carrier family 35, member F5, at 476780 to 478513 12111 mRNA_3744: 12112 - KOG0955 PHD finger protein BR140/LIN-49, at 479560 to 485967 12112
Group Condition mRNA_3740 mRNA_3741 mRNA_3742 mRNA_3743 mRNA_3744
12108
12109
12110
12111
12112
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.5 -0.4 -0.3 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.6 -0.4 0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -1.1 -0.3 -0.0 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.6 -0.9 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.6 -0.7 -0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.4 -0.7 0.0 0.5
auxotrophy YNB Glucose 0.0 -0.7 0.2 0.1 0.2
growth on oleic acid YNB Glucose 0.1 -0.7 0.3 -0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 0.2 0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.7 0.1 0.1 0.4
growth on ricinoleic acid YNB Glucose 0.2 -0.2 -0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.1 0.4 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.3 -0.1 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 0.2 0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.6 0.2 0.1 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1 0.3 -0.0 -0.1
growth on ypd YPD 0.1 0.2 -0.1 0.1 -0.1
auxotrophy Dropout Complete 0.3 -0.9 0.4 0.1 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.1 0.3 -0.0 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4 -0.4 0.4 0.7
growth on oleic acid YNB Oleic Acid 0.4 -0.3 0.4 0.0 0.8
remove
mRNA_3740
plot
remove
mRNA_3741
plot
remove
mRNA_3742
remove
mRNA_3743
plot
remove
mRNA_3744
plot