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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453754 to 456999
12100
mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457405 to 460471
12101
mRNA_3734: 12102 - Interpro Protein HRI1, at 460954 to 461748
12102
mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461901 to 463089
12103
mRNA_3736: 12104 - K00573 E2.1.1.77, pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 463337 to 464527
12104
Group
Condition
mRNA_3732
mRNA_3733
mRNA_3734
mRNA_3735
mRNA_3736
12100
12101
12102
12103
12104
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.2
-1.0
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.0
-0.7
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.6
0.3
-1.9
auxotrophy
YNB Glucose 75mM Methionine
-0.1
0.1
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.3
-0.3
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.0
0.2
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.3
0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.2
-0.3
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.5
-0.0
-0.5
auxotrophy
YNB Glucose
-0.4
0.2
0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.4
0.3
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
1.0
-0.2
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.4
0.4
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
0.6
0.5
growth on ypd
YPD
-0.1
-0.1
-0.7
1.7
auxotrophy
Dropout Complete
-0.2
0.4
0.7
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.7
-0.3
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.0
0.5
1.0
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.3
0.4
0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.5
0.3
1.0
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