Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3731: 12099 - K00820 glmS, GFPT glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 449924 to 452631 12099 mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453754 to 456999 12100 mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457405 to 460471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460954 to 461748 12102 mRNA_3735: 12103 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 461901 to 463089 12103
Group Condition mRNA_3731 mRNA_3732 mRNA_3733 mRNA_3734 mRNA_3735
12099
12100
12101
12102
12103
growth on ypd YPD     -0.1 -0.1 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.4 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate     -0.2 0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.1 0.2 -1.0
facs on lipid accumulation Sorted No BODIPY Gate     0.1 -0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate     -0.3 0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine     -0.1 0.1 -0.2
growth on oleic acid YNB Oleic Acid     -0.0 -0.4 0.3
auxotrophy YNB Glucose     -0.4 0.2 0.3
growth on oleic acid YNB Glucose     -0.1 -0.0 0.2
growth on ricinoleic acid YNB Glucose     -0.1 -0.3 0.6
growth on ricinoleic acid YNB Ricinoleic Acid     -0.3 0.0 0.5
auxotrophy YNB Glucose 75mM Arginine     -0.3 0.3 0.3
ypd buoyancy 40 hrs High Buoyancy     0.1 0.7 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 0.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.0 0.4 0.4
ypd buoyancy 40 hrs Low Buoyancy     -0.0 0.5 0.3
ypd buoyancy 40 hrs No Buoyancy Separation     1.0 -0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy     0.2 0.3 0.4
auxotrophy Dropout Complete     -0.2 0.4 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.3 0.6 0.3
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