Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3730: 12098 - KOG1268 Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains, at 446809 to 447756 12098 mRNA_3731: 12099 - K00820 glmS, GFPT glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 449924 to 452631 12099 mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453754 to 456999 12100 mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457405 to 460471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460954 to 461748 12102
Group Condition mRNA_3730 mRNA_3731 mRNA_3732 mRNA_3733 mRNA_3734
12098
12099
12100
12101
12102
growth on ricinoleic acid YNB Methylricinoleic Acid       -0.4 -0.2
growth on oleic acid YNB Oleic Acid       -0.0 -0.4
growth on ricinoleic acid YNB Glucose       -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid       -0.3 0.0
auxotrophy YNB Glucose       -0.4 0.2
growth on ypd YPD       -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate       -0.2 0.0
growth on oleic acid YNB Glucose       -0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate       -0.3 0.3
auxotrophy YNB Glucose 75mM Arginine       -0.3 0.3
auxotrophy YNB Glucose 75mM Methionine       -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate       0.1 -0.0
auxotrophy Dropout Complete       -0.2 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy       0.0 0.4
ypd buoyancy 40 hrs Low Buoyancy       -0.0 0.5
ypd buoyancy 40 hrs Median Buoyancy       0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy       0.1 0.5
ypd buoyancy 40 hrs High Buoyancy       0.1 0.7
ypd buoyancy 40 hrs No Buoyancy Separation       1.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy       0.3 0.6
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