Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3717: 12085 - K03979 obgE, cgtA GTPase, at 418976 to 421073 12085 mRNA_3718: 12086 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 421354 to 423944 12086 mRNA_3719: 12087 - K04043 dnaK molecular chaperone DnaK, at 424597 to 426828 12087 mRNA_3720: 12088 - HMMPfam-Conserved hypothetical protein (DUF2461)-PF09365,TIGRFAM-TIGR02453 TIGR02453 family protein-TIGR02453, at 427096 to 428543 12088 mRNA_3721: 12089 - K14544 UTP22, NOL6 U3 small nucleolar RNA-associated protein 22, at 428760 to 433033 12089
Group Condition mRNA_3717 mRNA_3718 mRNA_3719 mRNA_3720 mRNA_3721
12085
12086
12087
12088
12089
auxotrophy Dropout Complete   -0.4   -0.2  
growth on oleic acid YNB Glucose   -0.3   -0.3  
auxotrophy YNB Glucose 75mM Arginine   -0.4   -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2   -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1   -0.4  
growth on oleic acid YNB Oleic Acid   -0.2   -0.1  
ypd buoyancy 40 hrs Low Buoyancy   -0.3   0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2   -0.0  
auxotrophy YNB Glucose   -0.2   0.0  
auxotrophy YNB Glucose 75mM Methionine   -0.0   -0.1  
ypd buoyancy 40 hrs Median Buoyancy   -0.1   0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1   0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.0   -0.1  
ypd buoyancy 40 hrs High Buoyancy   -0.1   0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2   0.2  
facs on lipid accumulation Sorted High BODIPY Gate   0.0   0.1  
growth on ricinoleic acid YNB Glucose   0.0   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   0.3   0.0  
facs on lipid accumulation Sorted No BODIPY Gate   0.3   0.1  
growth on ypd YPD   0.4   0.0  
ypd buoyancy 40 hrs No Buoyancy Separation   0.4   0.1  
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