Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3714: 12082 - K14006 SEC23 protein transport protein SEC23, at 412824 to 415636 12082 mRNA_3715: 12083 - K11713 PGTB1 geranylgeranyl transferase type-1 subunit beta, at 415871 to 417515 12083 mRNA_3716: 12084 - K13348 MPV17 protein Mpv17, at 417804 to 418761 12084 mRNA_3717: 12085 - K03979 obgE, cgtA GTPase, at 418976 to 421073 12085 mRNA_3718: 12086 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 421354 to 423944 12086
Group Condition mRNA_3714 mRNA_3715 mRNA_3716 mRNA_3717 mRNA_3718
12082
12083
12084
12085
12086
auxotrophy YNB Glucose 75mM Methionine     -1.7   -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     -1.3   -0.2
auxotrophy YNB Glucose 75mM Arginine     -0.9   -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -1.3   0.1
facs on lipid accumulation Sorted High BODIPY Gate     -1.0   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.9   0.0
auxotrophy Dropout Complete     -0.4   -0.4
auxotrophy YNB Glucose     -0.6   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.5   -0.2
facs on lipid accumulation Sorted Low BODIPY Gate     -0.8   0.3
growth on oleic acid YNB Glucose     -0.2   -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.4   -0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.6   0.3
ypd buoyancy 40 hrs No Buoyancy Separation     -0.6   0.4
growth on ricinoleic acid YNB Ricinoleic Acid     0.1   -0.2
ypd buoyancy 40 hrs Median Buoyancy     0.0   -0.1
ypd buoyancy 40 hrs Low Buoyancy     0.3   -0.3
growth on oleic acid YNB Oleic Acid     0.2   -0.2
ypd buoyancy 40 hrs High Buoyancy     0.3   -0.1
growth on ricinoleic acid YNB Glucose     0.1   0.0
growth on ypd YPD     0.7   0.4
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