Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408733 to 409937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410154 to 411574 12080 mRNA_3713: 12081 - KOG4756 Mitochondrial ribosomal protein L27, at 411830 to 412320 12081 mRNA_3714: 12082 - K14006 SEC23 protein transport protein SEC23, at 412824 to 415636 12082 mRNA_3715: 12083 - K11713 PGTB1 geranylgeranyl transferase type-1 subunit beta, at 415871 to 417515 12083
Group Condition mRNA_3711 mRNA_3712 mRNA_3713 mRNA_3714 mRNA_3715
12079
12080
12081
12082
12083
ypd buoyancy 40 hrs High Buoyancy -0.6        
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4        
ypd buoyancy 40 hrs Low Buoyancy -0.4        
ypd buoyancy 40 hrs Median Buoyancy -0.3        
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2        
growth on ricinoleic acid YNB Ricinoleic Acid -0.1        
growth on ricinoleic acid YNB Glucose -0.1        
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0        
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0        
facs on lipid accumulation Sorted High BODIPY Gate 0.0        
auxotrophy Dropout Complete 0.1        
auxotrophy YNB Glucose 75mM Arginine 0.1        
facs on lipid accumulation Sorted No BODIPY Gate 0.1        
growth on ypd YPD 0.2        
facs on lipid accumulation Sorted Low BODIPY Gate 0.2        
growth on oleic acid YNB Glucose 0.2        
auxotrophy YNB Glucose 0.2        
growth on oleic acid YNB Oleic Acid 0.3        
auxotrophy YNB Glucose 75mM Methionine 0.3        
ypd buoyancy 40 hrs No Buoyancy Separation 0.3        
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5        
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