Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406586 to 407790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408038 to 408694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408733 to 409937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410154 to 411574 12080 mRNA_3713: 12081 - KOG4756 Mitochondrial ribosomal protein L27, at 411830 to 412320 12081
Group Condition mRNA_3709 mRNA_3710 mRNA_3711 mRNA_3712 mRNA_3713
12077
12078
12079
12080
12081
ypd buoyancy 40 hrs High Buoyancy -0.4   -0.6    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   -0.4    
ypd buoyancy 40 hrs Low Buoyancy -0.2   -0.4    
growth on ricinoleic acid YNB Glucose -0.3   -0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4   -0.0    
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.3    
growth on ricinoleic acid YNB Ricinoleic Acid -0.0   -0.1    
growth on oleic acid YNB Glucose -0.4   0.2    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -0.2    
growth on oleic acid YNB Oleic Acid -0.2   0.3    
growth on ypd YPD -0.1   0.2    
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   0.3    
facs on lipid accumulation Sorted No BODIPY Gate 0.0   0.1    
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   -0.0    
auxotrophy YNB Glucose 0.1   0.2    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   0.5    
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.2    
auxotrophy YNB Glucose 75mM Arginine 0.3   0.1    
auxotrophy Dropout Complete 0.3   0.1    
auxotrophy YNB Glucose 75mM Methionine 0.6   0.3    
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