Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3708: 12076 - Hypothetical Protein, at 405406 to 406282 12076 mRNA_3709: 12077 - SUPERFAMILY--SSF52540, at 406586 to 407790 12077 mRNA_3710: 12078 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408038 to 408694 12078 mRNA_3711: 12079 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 408733 to 409937 12079 mRNA_3712: 12080 - K00003 E1.1.1.3 homoserine dehydrogenase, at 410154 to 411574 12080
Group Condition mRNA_3708 mRNA_3709 mRNA_3710 mRNA_3711 mRNA_3712
12076
12077
12078
12079
12080
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4   -0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.3   -0.4  
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.0   -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.4   -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2   -0.4  
growth on ricinoleic acid YNB Glucose -0.0 -0.3   -0.1  
growth on ypd YPD -0.2 -0.1   0.2  
growth on oleic acid YNB Glucose 0.0 -0.4   0.2  
growth on oleic acid YNB Oleic Acid -0.1 -0.2   0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0   -0.3  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2   0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1   0.5  
auxotrophy YNB Glucose 75mM Arginine -0.2 0.3   0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.2   0.3  
auxotrophy Dropout Complete -0.2 0.3   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2   0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.2   -0.2  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.0   0.1  
auxotrophy YNB Glucose 0.1 0.1   0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.3   -0.0  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.6   0.3  
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