Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3703: 12071 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 394995 to 398800 12071 mRNA_3704: 12072 - Hypothetical Protein, at 399058 to 399573 12072 mRNA_3705: 12073 - Hypothetical Protein, at 399729 to 400196 12073 mRNA_3706: 12074 - KOG1550 Extracellular protein SEL-1 and related proteins, at 400186 to 402852 12074 mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403479 to 405078 12075
Group Condition mRNA_3703 mRNA_3704 mRNA_3705 mRNA_3706 mRNA_3707
12071
12072
12073
12074
12075
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   -0.4 -0.9  
growth on oleic acid YNB Glucose -0.2   -0.2 -0.5  
growth on ricinoleic acid YNB Glucose -0.0   -0.1 -0.7  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7   0.1 -0.2  
auxotrophy YNB Glucose 75mM Methionine -0.2   -0.1 -0.5  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -0.4 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   0.0 -0.6  
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.3 -0.4  
auxotrophy YNB Glucose -0.2   0.1 -0.6  
growth on ypd YPD -0.0   -0.3 -0.2  
auxotrophy Dropout Complete -0.2   0.1 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate 0.0   0.0 -0.1  
growth on oleic acid YNB Oleic Acid -0.2   -0.3 0.4  
ypd buoyancy 40 hrs High Buoyancy 0.1   0.1 -0.3  
auxotrophy YNB Glucose 75mM Arginine -0.1   0.3 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   0.2 -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.1 0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.3 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   0.3 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.3 -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   0.2 0.3  
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