Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3693: 12061 - K01714 dapA 4-hydroxy-tetrahydrodipicolinate synthase, at 373119 to 374635 12061 mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376601 to 378918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379073 to 379916 12063 mRNA_3696: 12064 - SUPERFAMILY--SSF53335, at 380275 to 383085 12064 mRNA_3697: 12065 - K04371 MAPK1_3 mitogen-activated protein kinase 1/3, at 383360 to 385326 12065
Group Condition mRNA_3693 mRNA_3694 mRNA_3695 mRNA_3696 mRNA_3697
12061
12062
12063
12064
12065
growth on oleic acid YNB Oleic Acid -0.7 -0.2 -0.1 -0.3  
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.0 -1.0 -0.0  
growth on oleic acid YNB Glucose -0.5 0.1 -0.1 -0.4  
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 -0.3 -0.0  
auxotrophy YNB Glucose -0.3 -0.5 -0.0 -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.0 -0.7 -0.2  
growth on ricinoleic acid YNB Glucose -0.4 -0.2 -0.1 0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.1 -0.3 0.0  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.4 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.5 -0.3 0.6  
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 0.1 0.1  
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 0.3 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.2 -0.2 0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 -0.1 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 0.1 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.4 0.8  
growth on ypd YPD 0.2 -0.2 0.1 0.1  
auxotrophy Dropout Complete -0.0 -0.2 0.2 0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.6 0.3 0.8  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.1 0.1 0.6  
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -0.0 -0.0 0.8  
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