Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3692: 12060 - K04371 MAPK1_3 mitogen-activated protein kinase 1/3, at 370780 to 372675 12060 mRNA_3693: 12061 - K01714 dapA 4-hydroxy-tetrahydrodipicolinate synthase, at 373119 to 374635 12061 mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376601 to 378918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379073 to 379916 12063 mRNA_3696: 12064 - SUPERFAMILY--SSF53335, at 380275 to 383085 12064
Group Condition mRNA_3692 mRNA_3693 mRNA_3694 mRNA_3695 mRNA_3696
12060
12061
12062
12063
12064
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.2 -0.1 -0.3 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 0.0 -1.0 -0.0
growth on oleic acid YNB Glucose -0.2 -0.5 0.1 -0.1 -0.4
growth on oleic acid YNB Oleic Acid 0.1 -0.7 -0.2 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.1 -0.4 0.2
growth on ricinoleic acid YNB Glucose 0.0 -0.4 -0.2 -0.1 0.1
auxotrophy YNB Glucose 0.5 -0.3 -0.5 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.7 -0.2 -0.4 -0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.2 -0.4 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 -0.3 0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 -0.2 -0.2 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 0.2 -0.0 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.2 -0.5 -0.3 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 -0.4 0.1 0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.0 -0.0 -0.0 0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.0 -0.2 -0.4 0.8
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0 -0.1 -0.1 0.1
growth on ypd YPD 0.1 0.2 -0.2 0.1 0.1
auxotrophy Dropout Complete 0.4 -0.0 -0.2 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 -0.6 0.3 0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 -0.1 0.1 0.6
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