Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3675: 12043 - K11251 H2A histone H2A, at 317314 to 317987 12043 mRNA_3676: 12044 - K11833 USP2_21 ubiquitin carboxyl-terminal hydrolase 2/21, at 319421 to 320803 12044 mRNA_3677: 12045 - KOG0266 WD40 repeat-containing protein, at 321286 to 323880 12045 mRNA_3678: 12046 - K14530 RPP40 ribonucleases P/MRP protein subunit RPP40, at 324600 to 326289 12046 mRNA_3679: 12047 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 326327 to 327835 12047
Group Condition mRNA_3675 mRNA_3676 mRNA_3677 mRNA_3678 mRNA_3679
12043
12044
12045
12046
12047
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   -0.7   0.1
auxotrophy YNB Glucose 75mM Methionine -0.2   -0.5   -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3   -0.4   -0.1
auxotrophy Dropout Complete -0.4   -0.1   -0.1
growth on oleic acid YNB Oleic Acid -0.1   -0.4   -0.0
growth on ricinoleic acid YNB Glucose -0.1   -0.5   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.1   -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3   -0.4   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.3   -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3   -0.1   -0.5
growth on oleic acid YNB Glucose -0.2   -0.1   0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0   -0.3   0.0
auxotrophy YNB Glucose 0.4   -0.4   -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0   0.6   -0.8
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -0.4   0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -0.1   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.0   1.1   -1.1
growth on ypd YPD 0.1   0.0   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.2   0.0
ypd buoyancy 40 hrs High Buoyancy 0.7   0.3   0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.4   0.5   0.2
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