Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314540 to 316836 12042 mRNA_3675: 12043 - K11251 H2A histone H2A, at 317314 to 317987 12043 mRNA_3676: 12044 - K11833 USP2_21 ubiquitin carboxyl-terminal hydrolase 2/21, at 319421 to 320803 12044 mRNA_3677: 12045 - KOG0266 WD40 repeat-containing protein, at 321286 to 323880 12045 mRNA_3678: 12046 - K14530 RPP40 ribonucleases P/MRP protein subunit RPP40, at 324600 to 326289 12046
Group Condition mRNA_3674 mRNA_3675 mRNA_3676 mRNA_3677 mRNA_3678
12042
12043
12044
12045
12046
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.3   -0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.3   -0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.0   -0.1  
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.0   -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.3   -0.3  
growth on oleic acid YNB Oleic Acid 0.1 -0.1   -0.4  
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.2   -0.5  
growth on oleic acid YNB Glucose 0.1 -0.2   -0.1  
growth on ricinoleic acid YNB Glucose 0.3 -0.1   -0.5  
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.3   -0.4  
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.2   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.4   0.5  
growth on ypd YPD -0.2 0.1   0.0  
auxotrophy Dropout Complete 0.5 -0.4   -0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2   -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1   0.2  
auxotrophy YNB Glucose 0.4 0.4   -0.4  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0   0.6  
ypd buoyancy 40 hrs High Buoyancy -0.1 0.7   0.3  
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.0   1.1  
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