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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3671: 12039 - K07562 NMD3 nonsense-mediated mRNA decay protein 3, at 309308 to 311181
12039
mRNA_3672: 12040 - BLAST putative ribonuclease mrp protein subunit rmp1 [Diapo..., at 311430 to 311771
12040
mRNA_3673: 12041 - K11251 H2A histone H2A, at 313222 to 314004
12041
mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314540 to 316836
12042
mRNA_3675: 12043 - K11251 H2A histone H2A, at 317314 to 317987
12043
Group
Condition
mRNA_3671
mRNA_3672
mRNA_3673
mRNA_3674
mRNA_3675
12039
12040
12041
12042
12043
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.1
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
-0.3
growth on ypd
YPD
-0.4
-0.2
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.4
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.0
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.0
growth on oleic acid
YNB Glucose
0.2
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.5
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.1
0.3
auxotrophy
Dropout Complete
0.5
0.5
-0.4
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.5
-0.2
auxotrophy
YNB Glucose
0.3
0.4
0.4
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