Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3671: 12039 - K07562 NMD3 nonsense-mediated mRNA decay protein 3, at 309308 to 311181 12039 mRNA_3672: 12040 - BLAST putative ribonuclease mrp protein subunit rmp1 [Diapo..., at 311430 to 311771 12040 mRNA_3673: 12041 - K11251 H2A histone H2A, at 313222 to 314004 12041 mRNA_3674: 12042 - K00128 ALDH aldehyde dehydrogenase (NAD+), at 314540 to 316836 12042 mRNA_3675: 12043 - K11251 H2A histone H2A, at 317314 to 317987 12043
Group Condition mRNA_3671 mRNA_3672 mRNA_3673 mRNA_3674 mRNA_3675
12039
12040
12041
12042
12043
ypd buoyancy 40 hrs No Buoyancy Separation     -0.4 -1.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid     -0.2 -0.3 -0.3
growth on ypd YPD     -0.4 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy     -0.3 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.0 -0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate     -0.5 0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate     -0.4 -0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.0 0.2 -0.3
growth on oleic acid YNB Oleic Acid     -0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.1 -0.3 0.3
ypd buoyancy 40 hrs Median Buoyancy     -0.1 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate     0.1 -0.1 0.0
growth on oleic acid YNB Glucose     0.2 0.1 -0.2
growth on ricinoleic acid YNB Glucose     -0.1 0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine     0.1 0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy     0.1 -0.1 0.2
ypd buoyancy 40 hrs High Buoyancy     -0.2 -0.1 0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.3 -0.1 0.3
auxotrophy Dropout Complete     0.5 0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine     0.4 0.5 -0.2
auxotrophy YNB Glucose     0.3 0.4 0.4
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