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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297311 to 299921
12034
mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300155 to 301036
12035
mRNA_3668: 12036 - K08870 TWF twinfilin, at 301158 to 305676
12036
mRNA_3669: 12037 - KOG1756 Histone 2A, at 305841 to 306858
12037
mRNA_3670: 12038 - HMMPfam-GRIP-related Arf-binding domain-PF10375,ProSiteProfiles-GRIP domain profile.-PS50913, at 307029 to 308993
12038
Group
Condition
mRNA_3666
mRNA_3667
mRNA_3668
mRNA_3669
mRNA_3670
12034
12035
12036
12037
12038
facs on lipid accumulation
Sorted High BODIPY Gate
-3.3
0.0
0.9
growth on ypd
YPD
-0.3
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.0
0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.1
0.2
ypd buoyancy
40 hrs High Buoyancy
0.3
0.0
-0.6
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
0.1
0.5
auxotrophy
Dropout Complete
0.2
0.1
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.4
0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.4
0.3
auxotrophy
YNB Glucose
0.5
0.1
0.0
growth on oleic acid
YNB Glucose
0.6
0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
0.9
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.4
growth on oleic acid
YNB Oleic Acid
0.6
0.2
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.1
0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
0.3
0.1
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