Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3660: 12028 - HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540, at 285259 to 286189 12028 mRNA_3661: 12029 - Hypothetical Protein, at 286182 to 286643 12029 mRNA_3662: 12030 - KOG2768 Translation initiation factor 2, beta subunit (eIF-2beta), at 286767 to 288003 12030 mRNA_3663: 12031 - K01738 cysK cysteine synthase A, at 288181 to 289942 12031 mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290844 to 292094 12032
Group Condition mRNA_3660 mRNA_3661 mRNA_3662 mRNA_3663 mRNA_3664
12028
12029
12030
12031
12032
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.4 0.0 -2.3 -4.1
growth on oleic acid YNB Glucose -0.4 -0.1 0.0 -2.4 -4.2
growth on ricinoleic acid YNB Glucose 0.0 -0.1 -0.0 -2.8 -3.3
auxotrophy YNB Glucose 0.0 -0.3 0.0 -2.9 -2.8
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.4 0.2 -3.1 -2.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 0.3 -0.9 -4.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.1 0.1 -2.6 -2.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 -0.2 -0.1 -0.9 -2.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.3 0.1 -0.2 -4.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 -0.1 -3.3 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.0 -0.1 -1.3 -2.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.6 -0.0 -0.5 -1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 0.0 -0.1 -2.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.5 0.0 0.3 -2.2
growth on ypd YPD -0.3 -0.4 0.1 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.1 0.0 1.0 -1.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 -0.0 0.4 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.3 0.0 0.5 -0.2
auxotrophy Dropout Complete -0.2 -0.4 0.0 -0.6 1.7
growth on oleic acid YNB Oleic Acid 0.1 0.2 0.1 -0.5 0.9
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.0 0.0 0.5 0.5
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