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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3655: 12023 - KOG1721 FOG Zn-finger, at 271428 to 272912
12023
mRNA_3656: 12024 - Hypothetical Protein, at 272943 to 273266
12024
mRNA_3657: 12025 - Hypothetical Protein, at 273428 to 273670
12025
mRNA_3658: 12026 - Hypothetical Protein, at 282241 to 283121
12026
mRNA_3659: 12027 - Hypothetical Protein, at 283501 to 284501
12027
Group
Condition
mRNA_3655
mRNA_3656
mRNA_3657
mRNA_3658
mRNA_3659
12023
12024
12025
12026
12027
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.9
-0.6
0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.9
-0.7
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-1.8
-0.2
0.1
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.6
-0.7
0.1
-0.1
auxotrophy
Dropout Complete
-0.1
-0.6
-0.2
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-1.0
0.3
0.0
0.1
growth on oleic acid
YNB Glucose
0.1
-0.7
-0.3
0.1
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.9
0.7
-0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
-0.3
0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.3
0.5
-0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
-0.2
0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.8
1.2
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
0.1
-0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.6
0.2
0.1
0.2
auxotrophy
YNB Glucose
-0.1
-0.6
1.0
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.4
1.1
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.4
0.5
0.1
0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
1.6
-0.8
0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.6
0.6
0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.6
0.5
0.1
0.8
growth on ypd
YPD
-0.3
0.5
1.6
0.1
0.2
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