Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3649: 12017 - HMMPfam-Protein of unknown function, DUF604-PF04646, at 253942 to 255854 12017 mRNA_3650: 12018 - Hypothetical Protein, at 256801 to 258115 12018 mRNA_3651: 12019 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 258338 to 258829 12019 mRNA_3652: 12020 - K17278 PGRMC1_2 membrane-associated progesterone receptor component, at 259462 to 260271 12020 mRNA_3653: 12021 - KOG2437 Muskelin, at 260397 to 263923 12021
Group Condition mRNA_3649 mRNA_3650 mRNA_3651 mRNA_3652 mRNA_3653
12017
12018
12019
12020
12021
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.3 -1.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.3 -0.1 -0.1 -0.5
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.2 -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.3 -0.4 0.0 0.4
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.2 -0.0 -0.2 -0.1
growth on oleic acid YNB Glucose 0.4 -0.1 -0.3 -0.3 0.0
auxotrophy Dropout Complete 0.5 -0.3 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.4 -0.2 -0.3
auxotrophy YNB Glucose 0.6 -0.5 -0.3 0.1 0.0
growth on ypd YPD 0.4 -0.0 -0.2 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.1 0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.3 0.4 0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.0 0.1 -0.2 0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 -0.4 -0.5 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 -0.3 -0.4 0.1 -0.0
growth on ricinoleic acid YNB Glucose 1.0 -0.3 -0.1 -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.1 -0.4 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.8 -0.0 -0.3 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.3 0.5 -0.6 0.6
ypd buoyancy 40 hrs Median Buoyancy 0.5 0.1 0.1 0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 1.4 0.4 -0.0 -0.5 0.3
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