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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950
12012
mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626
12013
mRNA_3646: 12014 - Hypothetical Protein, at 249601 to 250328
12014
mRNA_3647: 12015 - Hypothetical Protein, at 250784 to 251947
12015
mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342
12016
Group
Condition
mRNA_3644
mRNA_3645
mRNA_3646
mRNA_3647
mRNA_3648
12012
12013
12014
12015
12016
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.5
0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
-0.1
auxotrophy
Dropout Complete
0.2
-0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
-0.3
auxotrophy
YNB Glucose
0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
-0.1
0.3
growth on oleic acid
YNB Glucose
0.2
-0.1
0.4
growth on ypd
YPD
0.7
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
0.5
-0.2
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.7
-0.2
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
-0.0
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.9
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
0.8
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.2
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.3
0.5
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