Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626 12013 mRNA_3646: 12014 - Hypothetical Protein, at 249601 to 250328 12014 mRNA_3647: 12015 - Hypothetical Protein, at 250784 to 251947 12015 mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342 12016
Group Condition mRNA_3644 mRNA_3645 mRNA_3646 mRNA_3647 mRNA_3648
12012
12013
12014
12015
12016
growth on ricinoleic acid YNB Glucose -0.1   -0.2 -0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.2 -0.2  
ypd buoyancy 40 hrs Low Buoyancy 0.1   -0.3 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   -0.3 -0.2  
ypd buoyancy 40 hrs High Buoyancy -0.5   0.3 0.2  
auxotrophy YNB Glucose 75mM Methionine 0.2   -0.1 -0.1  
auxotrophy Dropout Complete 0.2   -0.3 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.2 -0.3  
auxotrophy YNB Glucose 0.1   -0.1 0.2  
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.1 -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.1 0.3  
growth on oleic acid YNB Glucose 0.2   -0.1 0.4  
growth on ypd YPD 0.7   -0.1 0.0  
growth on oleic acid YNB Oleic Acid 0.5   -0.2 0.6  
facs on lipid accumulation Sorted No BODIPY Gate 0.3   0.2 0.4  
facs on lipid accumulation Sorted Low BODIPY Gate 0.7   -0.2 0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7   -0.0 0.4  
facs on lipid accumulation Sorted High BODIPY Gate 0.2   0.9 -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation 0.7   0.8 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.2 0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5   0.3 0.5  
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