Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997 12009 mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977 12010 mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234465 to 241327 12011 mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626 12013
Group Condition mRNA_3641 mRNA_3642 mRNA_3643 mRNA_3644 mRNA_3645
12009
12010
12011
12012
12013
facs on lipid accumulation Sorted Low BODIPY Gate -4.2   -0.1 0.7  
facs on lipid accumulation Sorted No BODIPY Gate -2.7   0.0 0.3  
facs on lipid accumulation Sorted High BODIPY Gate -1.8   -0.0 0.2  
ypd buoyancy 40 hrs No Buoyancy Separation -1.7   -0.3 0.7  
ypd buoyancy 40 hrs Low Buoyancy -1.1   -0.1 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   -0.3 -0.0  
ypd buoyancy 40 hrs High Buoyancy -0.1   0.1 -0.5  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   -0.6 0.1  
growth on ypd YPD -0.6   -0.2 0.7  
ypd buoyancy 40 hrs Median Buoyancy -0.3   0.0 0.2  
auxotrophy YNB Glucose -0.0   0.0 0.1  
auxotrophy Dropout Complete 0.2   -0.2 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3   -0.1 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4   -0.2 0.3  
auxotrophy YNB Glucose 75mM Methionine 0.2   0.0 0.2  
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.0 0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.0 0.5  
growth on ricinoleic acid YNB Glucose 0.6   0.2 -0.1  
growth on oleic acid YNB Glucose 0.9   0.0 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7   -0.2 0.7  
growth on oleic acid YNB Oleic Acid 1.9   -0.2 0.5  
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