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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997
12009
mRNA_3642: 12010 - K08818 CDC2L cell division cycle 2-like, at 232262 to 233977
12010
mRNA_3643: 12011 - HMMPfam-Protein of unknown function (DUF1765)-PF08578, at 234465 to 241327
12011
mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950
12012
mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626
12013
Group
Condition
mRNA_3641
mRNA_3642
mRNA_3643
mRNA_3644
mRNA_3645
12009
12010
12011
12012
12013
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.2
-0.1
0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-2.7
0.0
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-1.8
-0.0
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-0.3
0.7
ypd buoyancy
40 hrs Low Buoyancy
-1.1
-0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.6
0.1
growth on ypd
YPD
-0.6
-0.2
0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.3
0.0
0.2
auxotrophy
YNB Glucose
-0.0
0.0
0.1
auxotrophy
Dropout Complete
0.2
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.0
0.5
growth on ricinoleic acid
YNB Glucose
0.6
0.2
-0.1
growth on oleic acid
YNB Glucose
0.9
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
-0.2
0.7
growth on oleic acid
YNB Oleic Acid
1.9
-0.2
0.5
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