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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218829 to 220926
12005
mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221739 to 224481
12006
mRNA_3639: 12007 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 225683 to 228983
12007
mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229768 to 230624
12008
mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997
12009
Group
Condition
mRNA_3637
mRNA_3638
mRNA_3639
mRNA_3640
mRNA_3641
12005
12006
12007
12008
12009
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.3
-2.0
0.0
-4.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.6
-2.2
0.0
-1.7
growth on ypd
YPD
-0.3
-0.1
-2.4
0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
-0.9
-0.0
-1.8
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
-0.9
0.0
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.2
0.2
0.2
-2.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
-1.6
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
-1.2
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
-0.7
0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.6
0.1
0.7
ypd buoyancy
40 hrs High Buoyancy
0.1
0.0
-0.1
0.0
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.1
-0.8
0.0
0.9
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.1
-0.5
0.3
0.2
auxotrophy
YNB Glucose
0.2
-0.0
-0.3
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.2
0.3
0.2
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.4
0.9
0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.6
0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
1.7
0.3
-0.3
auxotrophy
Dropout Complete
0.4
-0.2
1.0
0.3
0.2
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
1.7
0.1
0.6
growth on oleic acid
YNB Oleic Acid
-0.2
0.0
1.4
0.4
1.9
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