Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3637: 12005 - KOG0730 AAA+-type ATPase, at 218829 to 220926 12005 mRNA_3638: 12006 - KOG1721 FOG Zn-finger, at 221739 to 224481 12006 mRNA_3639: 12007 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 225683 to 228983 12007 mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229768 to 230624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997 12009
Group Condition mRNA_3637 mRNA_3638 mRNA_3639 mRNA_3640 mRNA_3641
12005
12006
12007
12008
12009
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.3 -2.0 0.0 -4.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.6 -2.2 0.0 -1.7
growth on ypd YPD -0.3 -0.1 -2.4 0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 -0.9 -0.0 -1.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 -0.9 0.0 -1.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 0.2 0.2 -2.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.2 -1.6 -0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -1.2 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 -0.7 0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.6 0.1 0.7
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 -0.1 0.0 -0.1
growth on oleic acid YNB Glucose -0.0 -0.1 -0.8 0.0 0.9
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.1 -0.5 0.3 0.2
auxotrophy YNB Glucose 0.2 -0.0 -0.3 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 0.3 0.2 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 0.9 0.5 0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.2 0.6 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 1.7 0.3 -0.3
auxotrophy Dropout Complete 0.4 -0.2 1.0 0.3 0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.4 1.7 0.1 0.6
growth on oleic acid YNB Oleic Acid -0.2 0.0 1.4 0.4 1.9
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