Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_3632: 12000 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 207689 to 209563 12000 mRNA_3633: 12001 - KOG1074 Transcriptional repressor SALM, at 211047 to 213295 12001 mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213705 to 215567 12002 mRNA_3635: 12003 - BLAST similar to An07g01410 [Aspergillus kawachii IFO 4308], at 215730 to 216270 12003 mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217154 to 218587 12004
Group Condition mRNA_3632 mRNA_3633 mRNA_3634 mRNA_3635 mRNA_3636
12000
12001
12002
12003
12004
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.0 -0.3 -0.4  
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -0.6 0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.3 -0.4 -0.7  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 -0.3 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.2 -0.5 -0.1  
growth on oleic acid YNB Glucose -0.0 -0.4 0.0 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 0.3 -0.3  
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 -0.0 0.4  
growth on oleic acid YNB Oleic Acid -0.1 -0.3 -0.0 0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2 0.2 -0.3  
facs on lipid accumulation Sorted High BODIPY Gate -0.6 0.0 0.1 0.5  
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.4 0.3 0.5  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 0.5 -0.1  
auxotrophy Dropout Complete -0.4 -0.3 0.2 0.7  
auxotrophy YNB Glucose -0.1 -0.4 0.3 0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.0 0.0 -0.0  
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.0 -0.0 0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 0.2 -0.1  
growth on ricinoleic acid YNB Glucose 0.1 -0.0 0.3 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.3 0.5 -0.5  
growth on ypd YPD 0.4 0.5 0.1 0.5  
remove
mRNA_3632
plot		 remove
mRNA_3633
plot		 remove
mRNA_3634		 remove
mRNA_3635
plot		 remove
mRNA_3636
plot