Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_3623: 11991 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 190258 to 192689 11991 mRNA_3624: 11992 - SUPERFAMILY--SSF52047, at 193379 to 194590 11992 mRNA_3625: 11993 - K01176 AMY, amyA, malS alpha-amylase, at 194842 to 197624 11993 mRNA_3626: 11994 - BLAST SH3 domain-containing protein [Rhizoctonia solani AG-..., at 198016 to 198652 11994 mRNA_3627: 11995 - SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126, at 199548 to 202220 11995
Group Condition mRNA_3623 mRNA_3624 mRNA_3625 mRNA_3626 mRNA_3627
11991
11992
11993
11994
11995
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -1.1 -0.2 -0.4 -0.5
growth on oleic acid YNB Oleic Acid -0.5 -0.7 0.2 -0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -1.4 -0.3 0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.4 0.1 -1.3 -0.3
growth on oleic acid YNB Glucose -0.2 -0.3 0.2 0.0 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.8 -0.6 -0.0 -0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.5 0.1 0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.7 -0.0 0.3 0.2
auxotrophy YNB Glucose -0.3 0.0 -0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.6 0.2 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.6 0.1 0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.0 -0.5 -0.7 0.6 0.2
growth on ypd YPD 0.2 -0.6 0.4 1.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.4 0.3 0.5 0.3
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.7 0.6 0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.7 0.3 0.3 -0.1
auxotrophy Dropout Complete -0.4 1.3 -0.4 0.8 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 0.7 0.2 0.5 0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 0.5 0.0 0.8 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.0 0.6 0.4 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 1.0 0.5 0.2 -0.1
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